data_6VSV

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  6VSV
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    6VSV
_pdbx_vrpt_summary.PDB_deposition_date         2020-02-12
_pdbx_vrpt_summary.PDB_revision_number         3
_pdbx_vrpt_summary.PDB_revision_date           2023-10-11
_pdbx_vrpt_summary.report_creation_date        2023-10-05:04:31
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   N
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer  "Sodium channel subunit beta-4"  
2  water    water  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  2  
#
_pdbx_vrpt_summary_entity_geometry.ordinal        1
_pdbx_vrpt_summary_entity_geometry.PDB_model_num  1
_pdbx_vrpt_summary_entity_geometry.entity_id      1
_pdbx_vrpt_summary_entity_geometry.label_asym_id  A
_pdbx_vrpt_summary_entity_geometry.auth_asym_id   A
#
_pdbx_vrpt_summary_diffraction.exp_method              x-ray
_pdbx_vrpt_summary_diffraction.ordinal                 1
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate       25.135
_pdbx_vrpt_summary_diffraction.I_over_sigma            3.37(1.62A)
_pdbx_vrpt_summary_diffraction.num_miller_indices      15397
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean   0.485
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean  0.314
_pdbx_vrpt_summary_diffraction.twin_fraction           -h,-k,l:0.044
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso          "[27.039,27.039,21.668,0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy         0.213
_pdbx_vrpt_summary_diffraction.trans_NCS_details       "The largest off-origin peak in the Patterson function is 8.55% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.acentric_outliers       1
_pdbx_vrpt_summary_diffraction.centric_outliers        0
_pdbx_vrpt_summary_diffraction.PDB_resolution_high     1.62
_pdbx_vrpt_summary_diffraction.PDB_resolution_low      37.35
_pdbx_vrpt_summary_diffraction.PDB_R                   0.19
_pdbx_vrpt_summary_diffraction.PDB_Rfree               0.21
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
  1  1  1  A    9  LYS  A   37  .  ?     
  2  1  1  A   10  ALA  A   38  .  ?     
  3  1  1  A   11  THR  A   39  .  ?     
  4  1  1  A   12  ASP  A   40  .  ?     
  5  1  1  A   13  ILE  A   41  A  ?     
  6  1  1  A   13  ILE  A   41  B  ?     
  7  1  1  A   14  TYR  A   42  .  ?     
  8  1  1  A   15  ALA  A   43  .  ?     
  9  1  1  A   16  VAL  A   44  .  ?     
 10  1  1  A   17  ASN  A   45  .  ?     
 11  1  1  A   18  GLY  A   46  .  ?     
 12  1  1  A   19  THR  A   47  .  ?     
 13  1  1  A   20  GLU  A   48  .  ?     
 14  1  1  A   21  ILE  A   49  .  ?     
 15  1  1  A   22  LEU  A   50  .  ?     
 16  1  1  A   23  LEU  A   51  .  ?     
 17  1  1  A   24  PRO  A   52  .  ?     
 18  1  1  A   25  CYS  A   53  .  ?     
 19  1  1  A   26  THR  A   54  .  ?     
 20  1  1  A   27  PHE  A   55  .  ?     
 21  1  1  A   28  SER  A   56  .  ?     
 22  1  1  A   29  SER  A   57  .  ?     
 23  1  1  A   30  ALA  A   58  .  ?     
 24  1  1  A   31  PHE  A   59  .  ?     
 25  1  1  A   32  GLY  A   60  .  ?     
 26  1  1  A   33  PHE  A   61  .  ?     
 27  1  1  A   34  GLU  A   62  .  ?     
 28  1  1  A   35  ASP  A   63  .  ?     
 29  1  1  A   36  LEU  A   64  .  ?     
 30  1  1  A   37  HIS  A   65  .  ?     
 31  1  1  A   38  PHE  A   66  .  ?     
 32  1  1  A   39  ARG  A   67  .  ?     
 33  1  1  A   40  TRP  A   68  .  ?     
 34  1  1  A   41  THR  A   69  .  ?     
 35  1  1  A   42  TYR  A   70  .  ?     
 36  1  1  A   43  ASN  A   71  .  ?     
 37  1  1  A   44  SER  A   72  A  ?     
 38  1  1  A   44  SER  A   72  B  ?     
 39  1  1  A   45  SER  A   73  .  ?     
 40  1  1  A   46  ASP  A   74  .  ?     
 41  1  1  A   47  ALA  A   75  .  ?     
 42  1  1  A   48  PHE  A   76  .  ?     
 43  1  1  A   49  LYS  A   77  .  ?     
 44  1  1  A   50  ILE  A   78  .  ?     
 45  1  1  A   51  LEU  A   79  .  ?     
 46  1  1  A   52  THR  A   80  .  ?     
 47  1  1  A   53  GLU  A   81  A  ?     
 48  1  1  A   53  GLU  A   81  B  ?     
 49  1  1  A   54  GLY  A   82  .  ?     
 50  1  1  A   55  THR  A   83  .  ?     
 51  1  1  A   56  VAL  A   84  .  ?     
 52  1  1  A   57  LYS  A   85  .  ?     
 53  1  1  A   58  ASN  A   86  .  ?     
 54  1  1  A   59  GLU  A   87  .  ?     
 55  1  1  A   60  LYS  A   88  .  ?     
 56  1  1  A   61  SER  A   89  .  ?     
 57  1  1  A   62  ASP  A   90  .  ?     
 58  1  1  A   63  PRO  A   91  .  ?     
 59  1  1  A   64  LYS  A   92  A  ?     
 60  1  1  A   64  LYS  A   92  B  ?     
 61  1  1  A   65  VAL  A   93  .  ?     
 62  1  1  A   66  THR  A   94  .  ?     
 63  1  1  A   67  LEU  A   95  .  ?     
 64  1  1  A   68  LYS  A   96  A  ?     
 65  1  1  A   68  LYS  A   96  B  ?     
 66  1  1  A   69  ASP  A   97  A  ?     
 67  1  1  A   69  ASP  A   97  B  ?     
 68  1  1  A   70  ASP  A   98  .  ?     
 69  1  1  A   71  ASP  A   99  .  ?     
 70  1  1  A   72  ARG  A  100  .  ?     
 71  1  1  A   73  ILE  A  101  .  ?     
 72  1  1  A   74  THR  A  102  .  ?     
 73  1  1  A   75  LEU  A  103  A  ?     
 74  1  1  A   75  LEU  A  103  B  ?     
 75  1  1  A   76  VAL  A  104  .  ?     
 76  1  1  A   77  GLY  A  105  .  ?     
 77  1  1  A   78  SER  A  106  .  ?     
 78  1  1  A   82  LYS  A  110  .  ?     
 79  1  1  A   83  MET  A  111  .  ?     
 80  1  1  A   84  ASN  A  112  .  ?     
 81  1  1  A   85  ASN  A  113  .  ?     
 82  1  1  A   86  ILE  A  114  .  ?     
 83  1  1  A   87  SER  A  115  .  ?     
 84  1  1  A   88  ILE  A  116  .  ?     
 85  1  1  A   89  VAL  A  117  .  ?     
 86  1  1  A   90  LEU  A  118  A  ?     
 87  1  1  A   90  LEU  A  118  B  ?     
 88  1  1  A   91  ARG  A  119  .  ?     
 89  1  1  A   92  ASP  A  120  .  ?     
 90  1  1  A   93  LEU  A  121  .  ?     
 91  1  1  A   94  GLU  A  122  A  ?     
 92  1  1  A   94  GLU  A  122  B  ?     
 93  1  1  A   95  PHE  A  123  A  ?     
 94  1  1  A   95  PHE  A  123  B  ?     
 95  1  1  A   96  SER  A  124  .  ?     
 96  1  1  A   97  ASP  A  125  .  ?     
 97  1  1  A   98  THR  A  126  .  ?     
 98  1  1  A   99  GLY  A  127  .  ?     
 99  1  1  A  100  LYS  A  128  .  ?     
100  1  1  A  101  TYR  A  129  .  ?     
101  1  1  A  102  THR  A  130  .  ?     
102  1  1  A  103  CYS  A  131  .  ?     
103  1  1  A  104  HIS  A  132  .  ?     
104  1  1  A  105  VAL  A  133  .  ?     
105  1  1  A  106  LYS  A  134  .  ?     
106  1  1  A  107  ASN  A  135  .  ?     
107  1  1  A  108  PRO  A  136  .  ?     
108  1  1  A  109  LYS  A  137  .  ?     
109  1  1  A  110  GLU  A  138  .  ?     
110  1  1  A  111  ASN  A  139  .  ?     
111  1  1  A  112  ASN  A  140  .  ?     
112  1  1  A  113  LEU  A  141  A  ?     
113  1  1  A  113  LEU  A  141  B  ?     
114  1  1  A  114  GLN  A  142  .  ?     
115  1  1  A  115  HIS  A  143  .  ?     
116  1  1  A  116  HIS  A  144  .  ?     
117  1  1  A  117  ALA  A  145  .  ?     
118  1  1  A  118  THR  A  146  .  ?     
119  1  1  A  119  ILE  A  147  .  ?     
120  1  1  A  120  PHE  A  148  .  ?     
121  1  1  A  121  LEU  A  149  .  ?     
122  1  1  A  122  GLN  A  150  .  ?     
123  1  1  A  123  VAL  A  151  .  ?     
124  1  1  A  124  VAL  A  152  A  ?     
125  1  1  A  124  VAL  A  152  B  ?     
126  1  1  A  125  ASP  A  153  .  ?     
127  1  1  A  126  ARG  A  154  .  ?     
128  1  2  B    .  HOH  A  201  .  ?     
129  1  2  B    .  HOH  A  202  .  ?     
130  1  2  B    .  HOH  A  203  .  ?     
131  1  2  B    .  HOH  A  204  .  ?     
132  1  2  B    .  HOH  A  205  .  ?     
133  1  2  B    .  HOH  A  206  .  ?     
134  1  2  B    .  HOH  A  207  .  ?     
135  1  2  B    .  HOH  A  208  .  ?     
136  1  2  B    .  HOH  A  209  .  ?     
137  1  2  B    .  HOH  A  210  .  ?     
138  1  2  B    .  HOH  A  211  .  ?     
139  1  2  B    .  HOH  A  212  .  ?     
140  1  2  B    .  HOH  A  213  .  ?     
141  1  2  B    .  HOH  A  214  .  ?     
142  1  2  B    .  HOH  A  215  .  ?     
143  1  2  B    .  HOH  A  216  .  ?     
144  1  2  B    .  HOH  A  217  .  ?     
145  1  2  B    .  HOH  A  218  .  ?     
146  1  2  B    .  HOH  A  219  .  ?     
147  1  2  B    .  HOH  A  220  .  ?     
148  1  2  B    .  HOH  A  221  .  ?     
149  1  2  B    .  HOH  A  222  .  ?     
150  1  2  B    .  HOH  A  223  .  ?     
151  1  2  B    .  HOH  A  224  .  ?     
152  1  2  B    .  HOH  A  225  .  ?     
153  1  2  B    .  HOH  A  226  .  ?     
154  1  2  B    .  HOH  A  227  .  ?     
155  1  2  B    .  HOH  A  228  .  ?     
156  1  2  B    .  HOH  A  229  .  ?     
157  1  2  B    .  HOH  A  230  .  ?     
158  1  2  B    .  HOH  A  231  .  ?     
159  1  2  B    .  HOH  A  232  .  ?     
160  1  2  B    .  HOH  A  233  .  ?     
161  1  2  B    .  HOH  A  234  .  ?     
162  1  2  B    .  HOH  A  235  .  ?     
163  1  2  B    .  HOH  A  236  .  ?     
164  1  2  B    .  HOH  A  237  .  ?     
165  1  2  B    .  HOH  A  238  .  ?     
166  1  2  B    .  HOH  A  239  .  ?     
167  1  2  B    .  HOH  A  240  .  ?     
168  1  2  B    .  HOH  A  241  .  ?     
169  1  2  B    .  HOH  A  242  .  ?     
170  1  2  B    .  HOH  A  243  .  ?     
171  1  2  B    .  HOH  A  244  .  ?     
172  1  2  B    .  HOH  A  245  .  ?     
173  1  2  B    .  HOH  A  246  .  ?     
174  1  2  B    .  HOH  A  247  .  ?     
175  1  2  B    .  HOH  A  248  .  ?     
176  1  2  B    .  HOH  A  249  .  ?     
177  1  2  B    .  HOH  A  250  .  ?     
178  1  2  B    .  HOH  A  251  .  ?     
179  1  2  B    .  HOH  A  252  .  ?     
180  1  2  B    .  HOH  A  253  .  ?     
181  1  2  B    .  HOH  A  254  .  ?     
182  1  2  B    .  HOH  A  255  .  ?     
183  1  2  B    .  HOH  A  256  .  ?     
184  1  2  B    .  HOH  A  257  .  ?     
185  1  2  B    .  HOH  A  258  .  ?     
186  1  2  B    .  HOH  A  259  .  ?     
187  1  2  B    .  HOH  A  260  .  ?     
188  1  2  B    .  HOH  A  261  .  ?     
189  1  2  B    .  HOH  A  262  .  ?     
190  1  2  B    .  HOH  A  263  .  ?     
191  1  2  B    .  HOH  A  264  .  ?     
192  1  2  B    .  HOH  A  265  .  ?     
193  1  2  B    .  HOH  A  266  .  ?     
194  1  2  B    .  HOH  A  267  .  ?     
195  1  2  B    .  HOH  A  268  .  ?     
196  1  2  B    .  HOH  A  269  .  ?     
197  1  2  B    .  HOH  A  270  .  ?     
198  1  2  B    .  HOH  A  271  .  ?     
199  1  2  B    .  HOH  A  272  .  ?     
200  1  2  B    .  HOH  A  273  .  ?     
201  1  2  B    .  HOH  A  274  .  ?     
202  1  2  B    .  HOH  A  275  .  ?     
203  1  2  B    .  HOH  A  276  .  ?     
204  1  2  B    .  HOH  A  277  .  ?     
205  1  2  B    .  HOH  A  278  .  ?     
206  1  2  B    .  HOH  A  279  .  ?     
207  1  2  B    .  HOH  A  280  .  ?     
208  1  2  B    .  HOH  A  281  .  ?     
209  1  2  B    .  HOH  A  282  .  ?     
210  1  2  B    .  HOH  A  283  .  ?     
211  1  2  B    .  HOH  A  284  .  ?     
212  1  2  B    .  HOH  A  285  .  ?     
213  1  2  B    .  HOH  A  286  .  ?     
214  1  2  B    .  HOH  A  287  .  ?     
215  1  2  B    .  HOH  A  288  .  ?     
216  1  2  B    .  HOH  A  289  .  ?     
217  1  2  B    .  HOH  A  290  .  ?     
218  1  2  B    .  HOH  A  291  .  ?     
219  1  2  B    .  HOH  A  292  .  ?     
220  1  2  B    .  HOH  A  293  .  ?     
221  1  2  B    .  HOH  A  294  .  ?     
222  1  2  B    .  HOH  A  295  .  ?     
223  1  2  B    .  HOH  A  296  .  ?     
224  1  2  B    .  HOH  A  297  .  ?     
225  1  2  B    .  HOH  A  298  .  ?     
226  1  2  B    .  HOH  A  299  .  ?     
227  1  2  B    .  HOH  A  300  .  ?     
228  1  2  B    .  HOH  A  301  .  ?     
229  1  2  B    .  HOH  A  302  .  ?     
230  1  2  B    .  HOH  A  303  .  ?     
231  1  2  B    .  HOH  A  304  .  ?     
232  1  2  B    .  HOH  A  305  .  ?     
233  1  2  B    .  HOH  A  306  .  ?     
234  1  2  B    .  HOH  A  307  .  ?     
235  1  2  B    .  HOH  A  308  .  ?     
236  1  2  B    .  HOH  A  309  .  ?     
237  1  2  B    .  HOH  A  310  .  ?     
238  1  2  B    .  HOH  A  311  .  ?     
239  1  2  B    .  HOH  A  312  .  ?     
240  1  2  B    .  HOH  A  313  .  ?     
241  1  2  B    .  HOH  A  314  .  ?     
242  1  2  B    .  HOH  A  315  .  ?     
243  1  2  B    .  HOH  A  316  .  ?     
244  1  2  B    .  HOH  A  317  .  ?     
245  1  2  B    .  HOH  A  318  .  ?     
246  1  2  B    .  HOH  A  319  .  ?     
247  1  2  B    .  HOH  A  320  .  ?     
248  1  2  B    .  HOH  A  321  .  ?     
249  1  2  B    .  HOH  A  322  .  ?     
250  1  2  B    .  HOH  A  323  .  ?     
251  1  2  B    .  HOH  A  324  .  ?     
252  1  2  B    .  HOH  A  325  .  ?     
253  1  2  B    .  HOH  A  326  .  ?     
254  1  2  B    .  HOH  A  327  .  ?     
255  1  2  B    .  HOH  A  328  .  ?     
256  1  2  B    .  HOH  A  329  .  ?     
257  1  2  B    .  HOH  A  330  .  ?     
258  1  2  B    .  HOH  A  331  .  ?     
259  1  2  B    .  HOH  A  332  .  ?     
260  1  2  B    .  HOH  A  333  .  ?     
261  1  2  B    .  HOH  A  334  .  ?     
262  1  2  B    .  HOH  A  335  .  ?     
263  1  2  B    .  HOH  A  336  .  ?     
264  1  2  B    .  HOH  A  337  .  ?     
265  1  2  B    .  HOH  A  338  .  ?     
266  1  2  B    .  HOH  A  339  .  ?     
267  1  2  B    .  HOH  A  340  .  ?     
268  1  2  B    .  HOH  A  341  .  ?     
269  1  2  B    .  HOH  A  342  .  ?     
270  1  2  B    .  HOH  A  343  .  ?     
271  1  2  B    .  HOH  A  344  .  ?     
272  1  2  B    .  HOH  A  345  .  ?     
273  1  2  B    .  HOH  A  346  .  ?     
274  1  2  B    .  HOH  A  347  .  ?     
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  xtriage      1.13                                                                  Y  
2  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  N  
##
