data_8DX7

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  8DX7
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    8DX7
_pdbx_vrpt_summary.PDB_deposition_date         2022-08-02
_pdbx_vrpt_summary.PDB_revision_number         2
_pdbx_vrpt_summary.PDB_revision_date           2023-08-30
_pdbx_vrpt_summary.report_creation_date        2023-08-19:16:01
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds,mogul,buster-report,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   Y
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer      "DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*CP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3')"  
2  polymer      "DNA (5'-D(P*CP*CP*AP*CP*AP*CP*A)-3')"  
3  polymer      "DNA (5'-D(P*GP*GP*CP*TP*GP*CP*T)-3')"  
4  polymer      "DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3')"  
5  non-polymer  "SILVER ION"  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  2  
C  3  
D  4  
E  5  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all   x-ray  
2  4.92  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore    
2  RSRZ_outliers_percent  
3  R_value_R_free         
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
1  1  1    0.83  141614     ?     ?  
2  2  1    9.92    1210  3.80  6.02  
3  1  2  100.00  127900     ?     ?  
4  2  2  100.00    1007  3.72  6.10  
5  1  3   96.25  130704     ?     ?  
6  2  3  100.00    1135  3.80  6.02  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  A  1  1  A  100.00  
2  4  2  A  1  1  A  100.00  
3  3  2  B  1  2  B  100.00  
4  4  2  B  1  2  B  100.00  
5  3  2  C  1  3  C  100.00  
6  4  2  C  1  3  C  100.00  
7  3  2  D  1  4  D  100.00  
8  4  2  D  1  4  D  100.00  
#
loop_
_pdbx_vrpt_summary_entity_geometry.ordinal
_pdbx_vrpt_summary_entity_geometry.PDB_model_num
_pdbx_vrpt_summary_entity_geometry.entity_id
_pdbx_vrpt_summary_entity_geometry.label_asym_id
_pdbx_vrpt_summary_entity_geometry.auth_asym_id
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ
1  1  1  A  A  1.53  1.68  480  739  
2  1  2  B  B  1.47  1.93  155  235  
3  1  3  C  C  1.38  1.25  160  245  
4  1  4  D  D  1.47  1.82  161  245  
#
_pdbx_vrpt_summary_geometry.ordinal          1
_pdbx_vrpt_summary_geometry.clashscore       55.51
_pdbx_vrpt_summary_geometry.num_H_reduce     476
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ   956
_pdbx_vrpt_summary_geometry.bonds_RMSZ       1.69
_pdbx_vrpt_summary_geometry.num_angles_RMSZ  1464
_pdbx_vrpt_summary_geometry.angles_RMSZ      1.48
#
_pdbx_vrpt_summary_diffraction.exp_method                x-ray
_pdbx_vrpt_summary_diffraction.ordinal                   1
_pdbx_vrpt_summary_diffraction.bulk_solvent_b            551.122
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate         261.276
_pdbx_vrpt_summary_diffraction.I_over_sigma              0.37(4.87A)
_pdbx_vrpt_summary_diffraction.num_miller_indices        1546
_pdbx_vrpt_summary_diffraction.bulk_solvent_k            0.074
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean     0.496
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean    0.330
_pdbx_vrpt_summary_diffraction.Fo_Fc_correlation         0.984
_pdbx_vrpt_summary_diffraction.twin_fraction             h,-h-k,-l:0.083
_pdbx_vrpt_summary_diffraction.DCC_R                     0.16
_pdbx_vrpt_summary_diffraction.DCC_Rfree                 0.17
_pdbx_vrpt_summary_diffraction.EDS_R                     0.18
_pdbx_vrpt_summary_diffraction.EDS_res_high              4.77
_pdbx_vrpt_summary_diffraction.EDS_res_low               66.49
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso            "[280.648,280.648,171.513,-0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy           0.447
_pdbx_vrpt_summary_diffraction.trans_NCS_details         "The largest off-origin peak in the Patterson function is 7.37% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.B_factor_type             FULL
_pdbx_vrpt_summary_diffraction.acentric_outliers         1
_pdbx_vrpt_summary_diffraction.centric_outliers          0
_pdbx_vrpt_summary_diffraction.data_completeness         65.00
_pdbx_vrpt_summary_diffraction.number_reflns_R_free      63
_pdbx_vrpt_summary_diffraction.percent_free_reflections  4.08
_pdbx_vrpt_summary_diffraction.percent_RSRZ_outliers     0.00
_pdbx_vrpt_summary_diffraction.PDB_resolution_high       4.92
_pdbx_vrpt_summary_diffraction.PDB_resolution_low        33.25
_pdbx_vrpt_summary_diffraction.PDB_R                     0.16
_pdbx_vrpt_summary_diffraction.PDB_Rfree                 0.16
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_bond_outliers
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_clashes
_pdbx_vrpt_model_instance.ligand_of_interest
 1  1  1  A   1  DG  A    1  .  ?        ?     ?     2  ?     
 2  1  1  A   2  DA  A    2  .  ?        ?     1     6  ?     
 3  1  1  A   3  DG  A    3  .  ?        ?     1     5  ?     
 4  1  1  A   4  DC  A    4  .  ?        ?     ?     4  ?     
 5  1  1  A   5  DA  A    5  .  ?        ?     ?     3  ?     
 6  1  1  A   6  DG  A    6  .  ?        ?     ?     3  ?     
 7  1  1  A   7  DC  A    7  .  ?        1     1     2  ?     
 8  1  1  A   8  DC  A    8  .  ?        1     ?     1  ?     
 9  1  1  A   9  DT  A    9  .  ?        1     ?     ?  ?     
10  1  1  A  10  DG  A   10  .  ?        1     ?     4  ?     
11  1  1  A  11  DT  A   11  .  ?        ?     1     9  ?     
12  1  1  A  12  DC  A   12  .  ?        1     1     8  ?     
13  1  1  A  13  DT  A   13  .  ?        1     3     5  ?     
14  1  1  A  14  DG  A   14  .  ?        ?     ?     4  ?     
15  1  1  A  15  DG  A   15  .  ?        1     1     5  ?     
16  1  1  A  16  DA  A   16  .  ?        ?     ?     4  ?     
17  1  1  A  17  DC  A   17  .  ?        ?     ?     ?  ?     
18  1  1  A  18  DA  A   18  .  ?        ?     ?     2  ?     
19  1  1  A  19  DT  A   19  .  ?        ?     ?     ?  ?     
20  1  1  A  20  DC  A   20  .  ?        ?     ?     ?  ?     
21  1  1  A  21  DA  A   21  .  ?        ?     ?     ?  ?     
22  1  2  B   1  DC  B    1  .  ?        1     ?     1  ?     
23  1  2  B   2  DC  B    2  .  ?        ?     ?     6  ?     
24  1  2  B   3  DA  B    3  .  ?        1     ?     3  ?     
25  1  2  B   4  DC  B    4  .  ?        1     ?     6  ?     
26  1  2  B   5  DA  B    5  .  ?        4     ?    10  ?     
27  1  2  B   6  DC  B    6  .  ?        ?     ?     ?  ?     
28  1  2  B   7  DA  B    7  .  ?        ?     1     4  ?     
29  1  3  C   1  DG  C    8  .  ?        1     1    12  ?     
30  1  3  C   2  DG  C    9  .  ?        ?     ?     6  ?     
31  1  3  C   3  DC  C   10  .  ?        ?     ?     2  ?     
32  1  3  C   4  DT  C   11  .  ?        ?     ?     2  ?     
33  1  3  C   5  DG  C   12  .  ?        ?     ?     3  ?     
34  1  3  C   6  DC  C   13  .  ?        ?     ?     1  ?     
35  1  3  C   7  DT  C   14  .  ?        ?     2     ?  ?     
36  1  4  D   1  DC  D    1  .  ?        1     ?     2  ?     
37  1  4  D   2  DT  D    2  .  ?        ?     ?     4  ?     
38  1  4  D   3  DG  D    3  .  ?        ?     2     3  ?     
39  1  4  D   4  DA  D    4  .  ?        ?     ?     1  ?     
40  1  4  D   5  DT  D    5  .  ?        ?     ?     2  ?     
41  1  4  D   6  DG  D    6  .  ?        2     ?     4  ?     
42  1  4  D   7  DT  D    7  .  ?        ?     1     3  ?     
43  1  5  E   .  AG  B  101  .  ?        ?     ?     ?  Y     
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.OWAB
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
_pdbx_vrpt_model_instance_geometry.average_occupancy
 1   1    12  457.470    22  0.81    35  0.84  molprobity  1.000  
 2   2    11  504.390    24  0.84    37  1.34  molprobity  1.000  
 3   3    11  499.250    25  1.19    39  1.42  molprobity  1.000  
 4   4    11  484.950    21  1.63    32  1.16  molprobity  1.000  
 5   5    11  563.020    24  0.59    37  0.80  molprobity  1.000  
 6   6    11  595.390    25  1.31    39  1.29  molprobity  1.000  
 7   7    11  585.060    21  2.11    32  1.93  molprobity  1.000  
 8   8    11  422.330    21  2.42    32  1.69  molprobity  1.000  
 9   9    12  461.470    22  2.30    34  1.52  molprobity  1.000  
10  10    11  433.990    25  1.93    39  1.69  molprobity  1.000  
11  11    12  358.060    22  1.81    34  2.14  molprobity  1.000  
12  12    11  332.300    21  3.24    32  2.14  molprobity  1.000  
13  13    12  335.310    22  2.05    34  2.27  molprobity  1.000  
14  14    11  403.600    25  1.42    39  1.27  molprobity  1.000  
15  15    11  409.920    25  1.80    39  1.41  molprobity  1.000  
16  16    11  459.060    24  1.67    37  1.44  molprobity  1.000  
17  17    11  450.730    21  0.97    32  1.90  molprobity  1.000  
18  18    11  401.120    24  1.25    37  0.88  molprobity  1.000  
19  19    12  419.190    22  1.18    34  1.53  molprobity  1.000  
20  20    11  409.580    21  1.09    32  0.79  molprobity  1.000  
21  21    12  407.150    23  1.52    33  1.57  molprobity  1.000  
22  22    11  412.980    21  1.86    32  1.30  molprobity  1.000  
23  23    11  399.580    21  0.93    32  1.14  molprobity  1.000  
24  24    11  404.160    24  1.94    37  1.20  molprobity  1.000  
25  25    11  414.300    21  1.98    32  1.84  molprobity  1.000  
26  26    11  363.270    24  2.93    37  1.46  molprobity  1.000  
27  27    11  401.800    21  1.29    32  1.12  molprobity  1.000  
28  28    12  401.070    23  1.78    33  1.99  molprobity  1.000  
29  29    11  394.250    25  1.58    39  1.72  molprobity  1.000  
30  30    11  398.650    25  1.58    39  1.01  molprobity  1.000  
31  31    11  422.530    21  1.22    32  1.55  molprobity  1.000  
32  32    12  427.180    22  0.89    34  1.52  molprobity  1.000  
33  33    11  509.210    25  1.14    39  1.13  molprobity  1.000  
34  34    11  544.250    21  0.91    32  0.81  molprobity  1.000  
35  35    13  547.340    21  1.13    30  1.70  molprobity  1.000  
36  36    11  548.840    22  2.41    32  1.18  molprobity  1.000  
37  37    12  487.060    22  1.70    34  1.77  molprobity  1.000  
38  38    11  433.400    25  1.59    39  1.74  molprobity  1.000  
39  39    11  404.120    24  1.17    37  0.76  molprobity  1.000  
40  40    12  408.280    22  1.74    34  1.46  molprobity  1.000  
41  41    11  402.970    25  2.32    39  1.34  molprobity  1.000  
42  42    13  388.570    21  1.49    30  1.80  molprobity  1.000  
43  43     ?  158.650     ?     ?     ?     ?  ?           0.870  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
  1   1  "H3'"    1  0.45  2.51  
  2   1  "H3'"    2  0.44  1.82  
  3   2  "H1'"    3  0.63  1.98  
  4   2  C8       1  0.45  2.51  
  5   2  H8       2  0.44  1.82  
  6   2  H8       4  0.42  2.02  
  7   2  C6       5  0.42  3.07  
  8   2  OP2      4  0.42  2.02  
  9   3  OP2      3  0.63  1.98  
 10   3  "H2''"   6  0.55  2.07  
 11   3  C6       5  0.42  3.07  
 12   3  C4       7  0.42  3.06  
 13   3  C5       8  0.41  3.08  
 14   4  "H2'"    9  0.62  2.34  
 15   4  "O5'"    6  0.55  2.07  
 16   4  C6       7  0.42  3.06  
 17   4  C5       8  0.41  3.08  
 18   5  C8       9  0.62  2.34  
 19   5  C4      10  0.61  2.88  
 20   5  C2      11  0.41  3.08  
 21   6  C8      10  0.61  2.88  
 22   6  C4      11  0.41  3.08  
 23   6  C5      12  0.40  3.09  
 24   7  "H2''"  13  0.41  2.55  
 25   7  C5      12  0.40  3.09  
 26   8  C5      13  0.41  2.55  
 27  10  "H5''"  14  0.71  1.70  
 28  10  "H5''"  15  0.45  2.43  
 29  10  "H2'"   16  0.49  2.48  
 30  10  C5      17  0.40  2.74  
 31  11  H72     14  0.71  1.70  
 32  11  "H2''"  18  0.65  1.95  
 33  11  C6      16  0.49  2.48  
 34  11  C4      19  0.46  2.83  
 35  11  C7      15  0.45  2.43  
 36  11  H3      20  0.44  1.64  
 37  11  N3      21  0.43  2.67  
 38  11  "H1'"   22  0.42  2.19  
 39  11  O4      17  0.40  2.74  
 40  12  OP1     18  0.65  1.95  
 41  12  N4      23  0.63  2.64  
 42  12  N4      24  0.63  1.96  
 43  12  N4      19  0.46  2.83  
 44  12  N4      21  0.43  2.67  
 45  12  "H4'"   25  0.52  2.08  
 46  12  C4      26  0.44  3.05  
 47  12  OP2     22  0.42  2.19  
 48  13  "H2''"  27  0.77  2.20  
 49  13  "H2''"  28  0.48  2.28  
 50  13  "O3'"   29  0.56  2.59  
 51  13  OP1     25  0.52  2.08  
 52  13  C4      26  0.44  3.05  
 53  14  C5      27  0.77  2.20  
 54  14  C8      29  0.56  2.59  
 55  14  N7      28  0.48  2.28  
 56  14  "H2''"  30  0.42  2.18  
 57  15  "H2'"   31  0.60  1.67  
 58  15  "H2''"  32  0.58  2.03  
 59  15  "H2''"  33  0.49  2.12  
 60  15  "C2'"   34  0.46  2.28  
 61  15  OP2     30  0.42  2.18  
 62  16  H8      31  0.60  1.67  
 63  16  H8      34  0.46  2.28  
 64  16  "O5'"   32  0.58  2.03  
 65  16  "O4'"   33  0.49  2.12  
 66  18  C2      35  0.63  2.87  
 67  18  N3      36  0.45  2.64  
 68  22  "H5'"   37  0.40  2.21  
 69  23  "H2''"  38  0.60  2.36  
 70  23  "H2''"  39  0.59  2.18  
 71  23  "H5''"  40  0.55  1.70  
 72  23  "H5''"  41  0.49  2.48  
 73  23  H6      40  0.55  1.70  
 74  23  C6      41  0.49  2.48  
 75  24  C8      38  0.60  2.36  
 76  24  N7      39  0.59  2.18  
 77  24  "H1'"   42  0.41  2.19  
 78  25  "H2''"  43  0.72  2.25  
 79  25  "H2''"  44  0.41  1.82  
 80  25  C2      45  0.51  2.99  
 81  25  C4      46  0.43  2.86  
 82  25  C4      47  0.40  3.10  
 83  25  "O4'"   42  0.41  2.19  
 84  26  C8      43  0.72  2.25  
 85  26  C2      23  0.63  2.64  
 86  26  H2      24  0.63  1.96  
 87  26  H2      20  0.44  1.64  
 88  26  H8      48  0.51  1.92  
 89  26  H8      44  0.41  1.82  
 90  26  "O5'"   48  0.51  1.92  
 91  26  C5      45  0.51  2.99  
 92  26  N6      46  0.43  2.86  
 93  26  C6      47  0.40  3.10  
 94  28  "H1'"   49  0.70  1.73  
 95  28  C4      50  0.50  2.46  
 96  28  "C1'"   51  0.47  2.42  
 97  28  N9      52  0.41  2.35  
 98  29  "H3'"   53  0.85  1.42  
 99  29  "H3'"   54  0.69  2.25  
100  29  "H1'"   49  0.70  1.73  
101  29  "H1'"   50  0.50  2.46  
102  29  "H1'"   51  0.47  2.42  
103  29  "H1'"   52  0.41  2.35  
104  29  "C3'"   55  0.60  2.14  
105  29  "H2'"   56  0.46  2.31  
106  29  N3      56  0.46  2.31  
107  29  C4      57  0.45  3.05  
108  29  N2      58  0.43  2.34  
109  29  C2      59  0.41  3.08  
110  30  H8      53  0.85  1.42  
111  30  H8      55  0.60  2.14  
112  30  C8      54  0.69  2.25  
113  30  C8      57  0.45  3.05  
114  30  "H1'"   58  0.43  2.34  
115  30  C4      59  0.41  3.08  
116  31  "H2'"   60  0.41  2.21  
117  31  O2      60  0.41  2.21  
118  32  "H2''"  61  0.51  2.10  
119  32  "H2'"   62  0.48  2.48  
120  33  OP1     61  0.51  2.10  
121  33  C8      62  0.48  2.48  
122  33  C6      63  0.40  3.09  
123  34  C4      63  0.40  3.09  
124  36  "H2''"  64  0.52  2.07  
125  36  C6      65  0.44  2.52  
126  37  "H2'"   66  0.68  1.58  
127  37  "H2'"   67  0.66  2.30  
128  37  OP1     64  0.52  2.07  
129  37  H72     65  0.44  2.52  
130  38  H8      66  0.68  1.58  
131  38  C8      67  0.66  2.30  
132  38  "H2''"  68  0.43  2.53  
133  39  C8      68  0.43  2.53  
134  40  C6      69  0.48  2.49  
135  40  "H5'"   69  0.48  2.49  
136  41  "H2''"  70  0.68  1.75  
137  41  C2      35  0.63  2.87  
138  41  "C2'"   71  0.45  2.43  
139  41  N2      36  0.45  2.64  
140  42  "H5''"  70  0.68  1.75  
141  42  "H5''"  71  0.45  2.43  
142  42  "O3'"   37  0.40  2.21  
#
loop_
_pdbx_vrpt_instance_intra_bond_outliers.ordinal
_pdbx_vrpt_instance_intra_bond_outliers.instance_id
_pdbx_vrpt_instance_intra_bond_outliers.atom_1
_pdbx_vrpt_instance_intra_bond_outliers.atom_2
_pdbx_vrpt_instance_intra_bond_outliers.obs
_pdbx_vrpt_instance_intra_bond_outliers.mean
_pdbx_vrpt_instance_intra_bond_outliers.stdev
_pdbx_vrpt_instance_intra_bond_outliers.Z
 1   7  "C1'"  N1     1.591  1.488  0.013   7.93  
 2   8  "C1'"  N1     1.586  1.488  0.013   7.50  
 3   9  "C3'"  "O3'"  1.351  1.435  0.013  -6.45  
 4  10  "C3'"  "O3'"  1.359  1.435  0.013  -5.82  
 5  12  "C1'"  N1     1.623  1.488  0.013  10.35  
 6  13  C4     C5     1.398  1.445  0.009  -5.26  
 7  15  "C3'"  "O3'"  1.535  1.435  0.013   7.66  
 8  22  "C3'"  "O3'"  1.351  1.435  0.013  -6.43  
 9  24  N9     C4     1.337  1.374  0.006  -6.12  
10  25  C4     C5     1.385  1.425  0.008  -5.05  
11  26  C6     N1     1.309  1.351  0.007  -5.99  
12  26  N3     C4     1.292  1.344  0.006  -8.59  
13  26  N7     C5     1.350  1.388  0.006  -6.25  
14  26  N9     C4     1.339  1.374  0.006  -5.86  
15  29  "C3'"  "O3'"  1.351  1.435  0.013  -6.47  
16  36  OP3    P      1.488  1.607  0.012  -9.94  
17  41  "C5'"  "C4'"  1.572  1.509  0.011   5.75  
18  41  P      "O5'"  1.648  1.593  0.010   5.45  
#
loop_
_pdbx_vrpt_instance_intra_angle_outliers.ordinal
_pdbx_vrpt_instance_intra_angle_outliers.instance_id
_pdbx_vrpt_instance_intra_angle_outliers.atom_1
_pdbx_vrpt_instance_intra_angle_outliers.atom_2
_pdbx_vrpt_instance_intra_angle_outliers.atom_3
_pdbx_vrpt_instance_intra_angle_outliers.obs
_pdbx_vrpt_instance_intra_angle_outliers.mean
_pdbx_vrpt_instance_intra_angle_outliers.stdev
_pdbx_vrpt_instance_intra_angle_outliers.Z
_pdbx_vrpt_instance_intra_angle_outliers.link
 1   2  "O4'"  "C1'"  N9     112.253  108.000  0.700   6.08  ?     
 2   3  "O5'"  P      OP2    100.360  105.700  0.900  -5.93  ?     
 3   7  "O4'"  "C1'"  N1     113.532  108.000  0.700   7.90  ?     
 4  11  "O4'"  "C1'"  N1     112.906  108.000  0.700   7.01  ?     
 5  12  OP1    P      "O3'"  119.655  105.200  2.200   6.57  Y     
 6  13  C5     C4     O4     120.155  124.900  0.700  -6.78  ?     
 7  13  N3     C4     O4     123.397  119.900  0.600   5.83  ?     
 8  13  "O5'"  P      OP2    100.626  105.700  0.900  -5.64  ?     
 9  15  P      "O3'"  "C3'"  126.245  119.700  1.200   5.45  Y     
10  28  "O4'"  "C1'"  N9     113.280  108.000  0.700   7.54  ?     
11  29  "O4'"  "C4'"  "C3'"  101.464  106.000  0.600  -7.56  ?     
12  35  C5     C4     O4     120.985  124.900  0.700  -5.59  ?     
13  35  N3     C4     O4     123.616  119.900  0.600   6.19  ?     
14  38  "C1'"  "O4'"  "C4'"  104.526  110.100  1.000  -5.57  ?     
15  38  "O4'"  "C1'"  N9     111.912  108.000  0.700   5.59  ?     
16  42  "O4'"  "C4'"  "C3'"  102.333  104.500  0.400  -5.42  ?     
#
loop_
_pdbx_vrpt_model_instance_density.ordinal
_pdbx_vrpt_model_instance_density.instance_id
_pdbx_vrpt_model_instance_density.natoms_eds
_pdbx_vrpt_model_instance_density.RSRCC
_pdbx_vrpt_model_instance_density.RSR
_pdbx_vrpt_model_instance_density.RSRZ
 1   1  19  0.971  0.036  -1.541  
 2   2  21  0.979  0.044  -1.628  
 3   3  22  0.975  0.034  -1.557  
 4   4  19  0.986  0.036  -1.516  
 5   5  21  0.975  0.051  -1.566  
 6   6  22  0.966  0.060  -1.352  
 7   7  19  0.982  0.037  -1.509  
 8   8  19  0.970  0.054  -1.381  
 9   9  20  0.956  0.058  -1.628  
10  10  22  0.961  0.051  -1.423  
11  11  20  0.962  0.057  -1.636  
12  12  19  0.945  0.062  -1.321  
13  13  20  0.953  0.065  -1.568  
14  14  22  0.966  0.045  -1.470  
15  15  22  0.985  0.034  -1.557  
16  16  21  0.980  0.045  -1.619  
17  17  19  0.985  0.042  -1.471  
18  18  21  0.968  0.047  -1.602  
19  19  20  0.949  0.063  -1.585  
20  20  19  0.960  0.044  -1.456  
21  21  21  0.981  0.052  -1.557  
22  22  19  0.946  0.052  -1.396  
23  23  19  0.972  0.047  -1.434  
24  24  21  0.974  0.053  -1.549  
25  25  19  0.977  0.048  -1.426  
26  26  21  0.967  0.051  -1.566  
27  27  19  0.977  0.049  -1.419  
28  28  21  0.935  0.054  -1.540  
29  29  22  0.982  0.041  -1.502  
30  30  22  0.984  0.039  -1.518  
31  31  19  0.981  0.038  -1.501  
32  32  20  0.975  0.035  -1.824  
33  33  22  0.986  0.029  -1.597  
34  34  19  0.989  0.032  -1.546  
35  35  20  0.983  0.061  -1.602  
36  36  20  0.980  0.061  -1.329  
37  37  20  0.983  0.031  -1.858  
38  38  22  0.985  0.030  -1.589  
39  39  21  0.984  0.035  -1.708  
40  40  20  0.987  0.053  -1.670  
41  41  22  0.982  0.033  -1.565  
42  42  20  0.969  0.059  -1.619  
43  43   1  0.852  0.042       ?  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  mogul        unknown                                                               Y  
3  eds          2.35                                                                  Y  
4  dcc          '"2.27  (2023-04-10)"'                                                Y  
5  xtriage      1.13                                                                  Y  
6  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  Y  
##
